Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011832.1 Corchorus capsularis cultivar CVL-1 contig11853, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24689

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109--134
3
8.7
3
100
0
52
69
0
30
0
0.89
1039--1101
21
3.4
18
76
20
51
42
3
0
53
1.16
1041--1088
19
2.5
19
82
3
51
39
4
0
56
1.19
1311--1493
92
2.0
93
87
5
264
36
16
17
29
1.92
3078--3135
29
2.0
30
93
3
100
43
22
5
29
1.75
5371--5404
18
1.9
18
88
5
52
73
2
0
23
0.97
13345--13378
2
17.0
2
100
0
68
50
0
0
50
1.00
20596--20638
11
3.9
11
84
0
50
48
6
4
39
1.51
20592--20638
22
2.1
22
88
0
67
48
6
4
40
1.48
21159--21217
31
1.9
31
92
0
100
32
18
5
44
1.72
21942--22156
109
2.0
108
88
3
319
33
13
7
45
1.71
23054--23084
14
2.2
14
94
0
53
48
0
3
48
1.17

Tables:   1

The End!