Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011835.1 Corchorus capsularis cultivar CVL-1 contig11856, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16779

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
566--607
8
4.9
9
83
16
54
50
4
0
45
1.23
565--599
2
17.5
2
93
0
61
48
2
0
48
1.16
4730--4755
13
2.0
13
100
0
52
30
7
23
38
1.83
7395--7438
21
2.1
21
86
0
61
18
38
11
31
1.86
7498--7556
25
2.4
25
91
5
95
35
23
0
40
1.55
7708--7746
14
2.7
14
80
4
51
41
0
0
58
0.98
7716--7742
14
1.9
14
100
0
54
29
0
0
70
0.88
7952--7996
21
2.1
21
91
0
72
33
8
40
17
1.81
9384--9408
6
4.2
6
100
0
50
32
0
0
68
0.90

Tables:   1

The End!