Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011836.1 Corchorus capsularis cultivar CVL-1 contig11857, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24626

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
407--452
11
4.2
11
88
0
65
30
34
15
19
1.93
407--452
22
2.1
22
95
0
83
30
34
15
19
1.93
2359--2495
52
2.6
53
91
2
231
42
14
13
29
1.84
5788--5843
25
2.3
25
84
3
69
64
10
14
10
1.50
5907--5953
23
2.1
23
92
4
78
53
4
21
21
1.63
6481--6519
18
2.2
17
86
4
51
35
5
23
35
1.77
14299--14563
134
2.0
134
100
0
530
32
16
25
26
1.96
15932--15977
22
2.1
22
83
0
56
47
6
4
41
1.49
17631--17662
2
16.0
2
100
0
64
50
0
0
50
1.00
20831--20889
16
3.7
16
83
0
82
5
15
45
33
1.68
20832--20901
32
2.2
32
87
5
97
5
12
42
38
1.67
21057--21104
19
2.4
20
79
10
53
56
4
0
39
1.19
21641--21680
2
20.0
2
89
0
62
45
0
5
50
1.23

Tables:   1

The End!