Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011847.1 Corchorus capsularis cultivar CVL-1 contig11868, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29998

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1147--1188
6
7.0
6
94
0
75
80
0
19
0
0.70
2062--2099
3
12.7
3
100
0
76
0
31
0
68
0.90
2666--2705
20
2.0
20
100
0
80
40
0
30
30
1.57
23660--23711
16
3.2
16
78
8
61
51
34
9
3
1.53
23861--23947
32
2.7
32
87
0
120
39
34
10
16
1.82
23931--23964
17
2.1
17
88
5
52
35
38
14
11
1.83
25463--25499
14
2.6
15
83
12
51
37
0
10
51
1.37
25517--25551
18
1.9
18
88
0
52
31
0
17
51
1.45
25524--25567
18
2.4
18
80
0
52
27
2
13
56
1.49
27777--27869
39
2.4
39
96
0
168
37
0
6
55
1.25
27806--27868
17
3.4
17
72
19
63
39
0
6
53
1.26

Tables:   1

The End!