Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011855.1 Corchorus capsularis cultivar CVL-1 contig11876, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59945

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9525--9568
21
2.0
23
83
16
58
43
40
4
11
1.61
16021--16063
19
2.2
20
87
4
61
18
2
11
67
1.32
21395--21472
27
2.9
26
83
12
97
35
26
20
16
1.94
25820--25853
12
2.7
13
90
4
52
20
11
8
58
1.59
25847--25905
28
2.3
24
82
11
64
18
5
15
61
1.52
26158--26239
40
2.1
40
90
2
130
35
12
6
46
1.66
32848--32881
12
2.7
13
90
4
52
20
11
8
58
1.59
32875--32933
28
2.3
24
82
11
64
18
6
15
59
1.58
37767--37895
67
2.0
64
90
7
206
5
31
3
60
1.35
39044--39089
13
3.5
13
82
11
58
8
8
0
82
0.84
45669--45702
17
2.0
17
88
0
50
20
2
61
14
1.46
45944--45976
16
2.1
16
88
5
50
36
0
0
63
0.95
46320--46358
15
2.6
15
83
0
51
10
74
0
15
1.07
46316--46353
20
1.9
19
89
5
58
10
73
0
15
1.09
47820--47844
2
12.5
2
100
0
50
48
0
0
52
1.00
48414--48455
11
3.7
11
87
3
57
21
11
2
64
1.38

Tables:   1

The End!