Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011861.1 Corchorus capsularis cultivar CVL-1 contig11882, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13779

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7290--7343
21
2.6
21
100
0
108
25
38
25
9
1.86
10920--10957
2
19.0
2
100
0
76
50
0
0
50
1.00
11719--11765
22
2.1
22
96
0
85
29
21
8
40
1.83
11741--11846
33
3.2
33
95
0
194
29
16
5
48
1.70
11849--12159
70
4.2
69
81
10
302
24
21
9
44
1.81
11994--12069
40
1.9
39
91
2
125
26
22
6
44
1.77
11849--12171
36
8.8
35
80
14
323
23
21
9
45
1.81
12045--12205
46
3.7
46
80
17
227
22
21
9
45
1.81
12034--12207
81
2.1
81
100
0
348
23
21
10
44
1.83
12255--12390
35
3.9
35
91
3
206
27
11
11
50
1.72
12311--12374
20
3.5
20
64
27
50
26
12
7
53
1.66
12372--12455
41
2.0
41
88
4
125
19
22
11
46
1.82
12408--12573
74
2.2
74
83
2
208
24
22
8
44
1.80
12486--12560
40
1.9
38
86
5
105
22
24
6
46
1.75
12546--12652
41
2.6
41
80
12
121
27
16
8
47
1.75
12622--12796
71
2.5
70
80
4
199
27
19
11
41
1.85
12726--12887
41
4.0
41
91
2
238
25
17
12
43
1.84
13643--13694
24
2.2
24
86
6
70
28
25
23
23
1.99

Tables:   1

The End!