Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011869.1 Corchorus capsularis cultivar CVL-1 contig11890, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32553

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8503--8567
33
2.0
33
90
0
103
18
33
26
21
1.96
15031--15189
46
3.4
46
67
13
142
30
13
20
35
1.91
14989--15183
96
2.0
96
98
0
381
28
12
19
38
1.89
18921--18956
18
2.0
18
100
0
72
16
50
0
33
1.46
21182--21215
18
2.0
18
88
11
54
47
14
11
26
1.79
21834--21880
21
2.2
22
78
17
55
34
10
12
42
1.78
27274--27312
20
2.0
20
89
0
60
41
20
10
28
1.85
27813--27885
27
2.7
27
83
10
87
46
27
12
13
1.79
28193--28236
21
2.1
21
87
8
63
70
2
4
22
1.17

Tables:   1

The End!