Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011871.1 Corchorus capsularis cultivar CVL-1 contig11892, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11685

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
238--281
23
2.0
23
90
4
72
22
15
6
54
1.65
1232--1262
16
1.9
16
93
0
53
67
0
0
32
0.91
3751--3822
2
37.5
2
74
18
64
51
0
2
45
1.15
3795--3834
19
2.1
19
86
9
55
42
5
0
52
1.23
5102--5146
21
2.1
22
91
4
74
0
17
0
82
0.68
5503--5608
43
2.5
43
87
0
140
16
27
14
42
1.86
7356--7425
36
1.9
36
97
0
131
38
17
21
22
1.93

Tables:   1

The End!