Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011885.1 Corchorus capsularis cultivar CVL-1 contig11906, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9552

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1081--1126
20
2.1
23
84
11
62
30
2
2
65
1.16
4033--4102
29
2.4
29
85
2
86
38
28
12
20
1.89
5033--5065
2
16.5
2
87
12
50
51
3
0
45
1.16
5871--6068
108
1.8
109
87
4
301
43
22
13
20
1.87
6131--6614
168
2.9
165
85
3
637
29
16
16
38
1.90
7707--7744
11
3.5
11
89
10
51
39
0
2
57
1.12
9167--9552
166
2.3
166
81
5
510
30
15
17
36
1.91

Tables:   1

The End!