Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011887.1 Corchorus capsularis cultivar CVL-1 contig11908, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17865

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1510--1563
10
5.7
10
81
16
62
53
0
1
44
1.11
2422--2477
27
2.0
27
83
10
69
41
28
12
17
1.86
2437--2497
28
2.2
27
82
2
68
42
24
9
22
1.84
6587--6650
27
2.3
27
84
7
76
15
20
28
35
1.93
10767--10813
22
2.1
22
96
0
85
42
4
6
46
1.48
10767--10809
11
3.9
11
90
0
68
41
4
6
46
1.51
15906--15940
2
18.0
2
94
5
63
48
0
0
51
1.00

Tables:   1

The End!