Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011890.1 Corchorus capsularis cultivar CVL-1 contig11911, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19897

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62--145
32
2.6
32
96
0
150
15
44
28
11
1.82
209--303
33
2.9
33
83
0
100
9
30
44
15
1.79
210--326
33
3.6
32
78
6
92
11
33
41
13
1.80
4146--4260
56
2.1
56
100
0
230
37
12
23
26
1.90
5236--5278
22
2.0
22
90
9
70
32
25
0
41
1.56
15500--15536
2
18.0
2
94
5
65
48
0
2
48
1.15
15611--15649
15
2.4
17
87
8
55
64
7
28
0
1.21
19868--19897
2
15.0
2
100
0
60
50
0
50
0
1.00

Tables:   1

The End!