Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011902.1 Corchorus capsularis cultivar CVL-1 contig11923, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9716

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4922--4995
30
2.5
30
84
0
94
36
8
28
27
1.85
4922--4995
15
4.9
15
75
6
78
36
8
28
27
1.85
5044--5073
15
2.0
15
93
0
51
30
13
23
33
1.93
7900--7990
44
2.0
45
91
4
148
28
6
25
39
1.81
9394--9474
39
2.0
40
95
2
146
41
23
17
17
1.89

Tables:   1

The End!