Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011906.1 Corchorus capsularis cultivar CVL-1 contig11927, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28785

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
965--993
11
2.7
11
94
5
51
44
0
0
55
0.99
5574--5626
26
2.0
26
96
0
97
49
24
0
26
1.51
8530--8563
15
2.2
16
89
5
52
41
0
8
50
1.34
8740--8967
38
6.0
38
90
0
350
23
18
35
22
1.96
8966--8990
6
4.2
6
100
0
50
16
0
36
48
1.46
13632--13792
60
2.7
59
86
6
218
36
15
19
29
1.92
13834--13996
60
2.7
60
85
0
211
27
19
16
36
1.93
15315--15567
132
1.9
131
89
0
389
49
2
11
36
1.53
16046--16087
21
2.0
21
95
0
75
40
19
26
14
1.89
17169--17227
24
2.4
25
79
20
72
27
6
6
59
1.48
22569--22631
32
2.0
32
87
9
94
42
6
22
28
1.78

Tables:   1

The End!