Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011914.1 Corchorus capsularis cultivar CVL-1 contig11935, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23171

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1785--1922
65
2.1
65
100
0
276
29
15
21
33
1.94
3177--3233
12
4.5
13
79
14
66
38
8
21
31
1.84
3168--3233
25
2.6
25
95
0
114
39
9
19
31
1.83
3165--3233
13
5.8
12
73
21
56
39
10
20
30
1.85
9651--9708
15
3.5
15
80
19
55
46
3
1
48
1.29
9661--9708
17
2.7
18
78
15
55
50
4
2
43
1.33
10254--10347
36
2.6
37
87
1
154
27
15
35
21
1.94
11858--11896
20
2.0
20
89
0
60
15
15
17
51
1.77
20968--21001
5
7.0
5
96
3
61
17
0
0
82
0.67

Tables:   1

The End!