Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011918.1 Corchorus capsularis cultivar CVL-1 contig11939, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23753

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1332--1462
65
2.0
65
96
0
244
56
11
13
18
1.67
1892--1926
5
7.0
5
93
0
61
2
20
57
20
1.54
2408--2657
64
4.0
64
76
14
279
20
8
32
39
1.81
2413--2734
121
2.5
126
88
10
447
20
8
31
39
1.82
2586--2739
77
2.0
77
94
0
272
21
9
29
39
1.84
3243--3284
22
1.9
22
95
0
75
21
11
16
50
1.77
13717--13764
20
2.3
21
82
13
55
56
8
6
29
1.53
13776--13836
21
2.8
22
80
14
72
45
13
11
29
1.78
15041--15068
13
2.2
13
100
0
56
28
0
25
46
1.53
15252--15398
67
2.2
67
97
1
276
29
18
16
36
1.93

Tables:   1

The End!