Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011925.1 Corchorus capsularis cultivar CVL-1 contig11946, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35616

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
472--527
23
2.4
23
93
0
94
26
48
23
1
1.61
494--526
17
1.9
17
93
0
57
27
48
21
3
1.64
472--527
6
9.7
6
78
7
62
26
48
23
1
1.61
517--613
31
3.3
31
80
14
132
41
38
14
6
1.71
552--594
10
4.7
10
78
21
58
46
34
11
6
1.67
516--584
16
4.4
16
92
3
122
43
37
13
5
1.67
3574--3716
46
3.0
46
90
7
232
32
14
16
35
1.90
10239--10264
12
2.2
12
100
0
52
30
26
7
34
1.85
23841--23870
8
3.9
8
95
4
53
50
10
0
40
1.36
24140--24168
12
2.3
13
94
5
51
37
0
44
17
1.49
28058--28099
21
2.0
21
85
0
57
14
11
26
47
1.78
29820--29920
51
2.0
50
90
1
157
47
15
8
27
1.76
29894--29928
16
2.1
17
89
5
54
31
14
11
42
1.81

Tables:   1

The End!