Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011936.1 Corchorus capsularis cultivar CVL-1 contig11957, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12078

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
842--881
21
1.9
21
100
0
80
22
32
30
15
1.94
863--1008
33
4.4
33
81
10
131
19
41
28
10
1.85
7538--7718
75
2.4
75
87
2
258
38
11
21
28
1.88
8525--8562
14
2.7
15
84
12
53
73
0
26
0
0.83
8897--8934
16
2.4
16
90
0
58
81
0
18
0
0.69
9215--9366
50
3.0
50
87
1
225
35
15
13
34
1.88
9673--10589
70
13.2
70
90
2
1230
26
27
18
28
1.98
9673--10537
348
2.5
349
88
3
1253
26
27
17
28
1.98

Tables:   1

The End!