Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011943.1 Corchorus capsularis cultivar CVL-1 contig11964, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15039

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109--339
85
2.7
85
96
0
417
39
5
18
37
1.73
3402--3435
17
2.0
17
88
0
50
38
2
14
44
1.61
3860--3901
21
2.0
21
86
9
59
73
2
14
9
1.18
5653--5700
22
2.2
22
85
7
62
47
6
33
12
1.66
5810--6405
35
17.1
35
93
1
937
29
15
21
32
1.95
6358--6650
35
8.4
35
88
1
410
27
18
17
37
1.93
8635--8784
74
2.0
74
93
0
255
41
10
28
20
1.84
10449--10478
11
2.7
11
94
0
51
40
6
6
46
1.56
13230--13259
15
2.1
14
93
6
51
23
0
0
76
0.78
13302--13339
11
3.5
11
85
10
51
57
2
0
39
1.12
13669--13785
27
4.3
27
69
6
74
46
5
4
43
1.47
13653--13818
41
4.0
41
96
0
305
45
6
4
42
1.51
14628--14672
2
21.0
2
86
13
63
46
0
6
46
1.29

Tables:   1

The End!