Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011944.1 Corchorus capsularis cultivar CVL-1 contig11965, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20629

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
365--406
21
2.0
21
90
4
68
26
19
21
33
1.97
6325--6383
26
2.3
24
80
8
64
30
8
15
45
1.75
6648--6681
2
17.0
2
100
0
68
50
0
0
50
1.00
7104--7159
28
2.0
28
100
0
112
25
21
7
46
1.76
11943--12046
21
4.9
22
74
22
80
22
17
6
53
1.66
11961--12098
64
2.2
63
84
8
174
21
18
5
55
1.63
11963--12070
21
5.1
21
76
11
96
21
18
5
54
1.63
11976--12067
43
2.1
43
86
5
132
21
18
5
54
1.64
12373--12462
29
3.2
29
67
20
91
24
18
8
47
1.77
12369--12571
55
3.7
55
94
0
352
25
18
7
48
1.75
12568--12615
23
2.0
24
88
4
71
54
6
20
18
1.65
13383--13489
50
2.1
49
78
10
110
35
14
11
39
1.81
16315--16345
16
1.9
16
93
0
53
48
9
9
32
1.69
16593--16671
27
2.9
27
86
1
113
40
24
17
17
1.91

Tables:   1

The End!