Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011962.1 Corchorus capsularis cultivar CVL-1 contig11983, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30294

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--481
7
71.1
7
92
5
800
40
44
0
14
1.46
1--481
27
18.3
27
90
8
764
40
44
0
14
1.46
7693--7720
2
14.0
2
100
0
56
50
0
0
50
1.00
9057--9081
3
8.3
3
100
0
50
68
0
0
32
0.90
19512--19548
2
18.5
2
100
0
74
48
0
0
51
1.00
22365--22391
2
13.5
2
100
0
54
0
0
48
51
1.00
30248--30294
2
23.0
2
95
4
85
48
2
0
48
1.13

Tables:   1

The End!