Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011965.1 Corchorus capsularis cultivar CVL-1 contig11986, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36214

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1375--1434
31
1.9
31
100
0
120
36
15
10
38
1.80
9345--9379
6
5.7
6
96
3
61
14
2
0
82
0.77
21508--21544
6
6.2
6
100
0
74
0
16
51
32
1.45
29444--29504
26
2.3
25
88
8
86
42
6
0
50
1.28
31862--31888
2
13.5
2
100
0
54
51
0
0
48
1.00
32431--32488
23
2.5
23
88
0
80
36
6
13
43
1.71
32225--32800
22
26.6
21
67
15
194
37
9
15
37
1.80
32785--32874
40
2.2
40
84
7
112
45
10
10
34
1.71
32812--32892
40
2.0
40
87
0
117
49
7
9
33
1.64
33450--33514
25
2.7
25
88
4
89
36
12
20
30
1.89
33462--33513
25
2.1
25
96
0
95
34
9
19
36
1.84
33755--33803
25
2.0
25
91
0
80
38
12
18
30
1.87
34730--34755
5
5.2
5
100
0
52
80
0
0
19
0.71

Tables:   1

The End!