Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011967.1 Corchorus capsularis cultivar CVL-1 contig11988, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11765

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1056--1138
27
3.1
27
87
0
112
16
25
30
27
1.97
4422--4449
2
14.0
2
100
0
56
0
50
0
50
1.00
8203--8295
45
2.1
45
87
4
134
24
36
17
21
1.94
8265--8327
33
1.9
33
86
0
90
26
22
20
30
1.98
8423--8969
245
2.2
245
96
0
1006
33
15
14
36
1.88
10118--10194
39
2.0
40
92
2
129
12
12
20
53
1.72
10418--11213
324
2.4
324
79
7
818
36
13
15
34
1.87
11589--11643
21
2.6
21
97
0
92
54
12
21
10
1.68

Tables:   1

The End!