Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001197.1 Corchorus capsularis cultivar CVL-1 contig01197, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2384

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--31
2
13.5
2
100
0
54
48
0
0
51
1.00
1313--1356
22
2.0
22
86
0
61
29
18
11
40
1.85
1367--1452
45
1.9
45
82
0
109
37
16
12
33
1.87
1326--1799
22
21.7
22
70
12
189
36
16
9
37
1.81
1521--1606
23
3.8
22
86
10
102
37
15
9
38
1.79
1854--2045
44
4.4
44
73
15
139
34
13
10
41
1.79
1878--2107
22
10.5
22
68
12
105
33
14
10
40
1.81
2130--2370
22
10.8
21
66
19
87
36
18
7
36
1.80

Tables:   1

The End!