Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011970.1 Corchorus capsularis cultivar CVL-1 contig11991, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27827

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
414--485
29
2.4
30
79
4
83
41
26
9
22
1.84
9750--9774
5
5.0
5
100
0
50
20
40
0
40
1.52
14065--14095
7
4.4
7
100
0
62
32
38
0
29
1.57
15005--15032
6
4.7
6
100
0
56
17
17
0
64
1.30
19730--19754
2
12.5
2
100
0
50
52
0
0
48
1.00

Tables:   1

The End!