Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011971.1 Corchorus capsularis cultivar CVL-1 contig11992, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29167

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1291--1319
6
4.8
6
100
0
58
17
51
13
17
1.76
2949--3006
29
2.0
29
83
6
73
62
0
18
18
1.34
2990--3016
4
6.8
4
100
0
54
74
0
25
0
0.83
7199--7228
15
1.9
16
93
6
53
43
6
16
33
1.74
9343--9367
1
25.0
1
100
0
50
0
0
0
100
0.00
16171--16200
6
5.0
6
95
0
51
36
13
50
0
1.42
19394--19436
21
2.0
21
86
0
59
39
20
13
25
1.90
28848--28892
21
2.1
21
84
8
56
20
31
11
37
1.87

Tables:   1

The End!