Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011972.1 Corchorus capsularis cultivar CVL-1 contig11993, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41829

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
954--982
14
2.1
14
100
0
58
0
65
20
13
1.26
8325--8365
21
2.0
21
85
9
57
19
0
14
65
1.26
8438--8481
21
2.1
21
83
8
54
18
31
9
40
1.81
8677--8757
33
2.5
33
76
9
94
18
35
32
13
1.90
11905--11935
7
4.4
7
100
0
62
41
25
0
32
1.56
13303--13340
6
6.3
6
100
0
76
31
18
0
50
1.47
16349--16382
6
5.8
6
96
3
61
0
0
11
88
0.52
17675--17700
12
2.2
12
100
0
52
34
23
0
42
1.54

Tables:   1

The End!