Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011976.1 Corchorus capsularis cultivar CVL-1 contig11997, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39266

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6085--6323
78
3.2
77
90
7
359
49
0
12
37
1.44
6091--6323
70
3.2
71
85
10
310
49
0
12
37
1.45
7659--7703
21
2.1
21
84
8
56
33
17
13
35
1.89
22050--22098
17
2.9
16
82
8
62
32
22
22
22
1.98
27573--27610
19
2.1
18
90
5
58
28
39
23
7
1.83
35290--35319
10
3.0
10
90
0
51
86
0
13
0
0.57
37538--37572
5
7.0
5
100
0
70
20
20
0
60
1.37
38420--38559
51
2.8
49
88
4
217
49
22
5
22
1.69

Tables:   1

The End!