Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011979.1 Corchorus capsularis cultivar CVL-1 contig12000, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25197

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
222--255
2
17.0
2
93
0
59
47
2
0
50
1.16
281--2392
652
3.2
645
85
6
2656
31
14
16
36
1.90
281--2392
333
6.4
328
84
7
2640
31
14
16
36
1.90
2395--3782
335
4.2
333
86
6
1805
31
14
17
36
1.89
14223--14256
18
1.9
17
88
5
50
2
14
2
79
0.97
20873--20898
2
13.0
2
100
0
52
50
0
0
50
1.00
24001--24033
15
2.2
15
94
0
57
27
9
9
54
1.62
24238--24267
10
3.0
10
95
0
51
90
6
0
3
0.56
25028--25067
21
1.9
21
94
0
71
55
0
0
45
0.99

Tables:   1

The End!