Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011982.1 Corchorus capsularis cultivar CVL-1 contig12003, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24264

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
320--344
1
25.0
1
100
0
50
0
0
0
100
0.00
3982--4118
68
2.0
68
100
0
274
33
21
14
29
1.93
6657--6685
12
2.4
12
100
0
58
62
6
10
20
1.50
7048--7104
28
2.0
28
82
0
69
15
15
17
50
1.78
9540--9597
3
18.3
3
79
13
55
39
1
0
58
1.08
9540--9597
13
4.3
13
81
14
64
39
1
0
58
1.08
9544--9600
18
3.2
18
80
11
73
40
1
0
57
1.09
9540--9599
26
2.4
24
84
15
77
40
1
0
58
1.08
20049--20087
3
13.0
3
100
0
78
33
0
0
66
0.92
20369--20483
57
2.0
57
93
0
194
29
15
26
28
1.96

Tables:   1

The End!