Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011983.1 Corchorus capsularis cultivar CVL-1 contig12004, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17786

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--35
2
17.5
2
100
0
70
48
0
0
51
1.00
512--774
107
2.5
106
87
6
367
42
9
7
41
1.65
4777--5502
246
3.0
236
87
6
1059
38
21
18
20
1.93
8937--9023
43
2.0
43
90
0
138
29
5
33
31
1.81
10095--10197
53
1.9
53
86
7
147
37
24
20
17
1.93
10154--10233
31
2.6
31
95
0
142
38
25
18
17
1.92
10147--10279
31
4.3
31
87
0
140
34
25
21
18
1.96
11813--11859
22
2.1
23
88
4
69
57
8
2
31
1.41
11824--11873
22
2.3
22
82
6
57
60
6
2
32
1.32
11837--11875
15
2.6
15
83
0
51
56
5
2
35
1.35
13048--13077
12
2.5
12
100
0
60
36
30
26
6
1.82
14893--14966
31
2.5
30
80
12
82
21
24
18
35
1.96
14913--15011
31
3.2
31
85
1
137
23
23
22
31
1.99
17748--17786
2
19.0
2
94
5
69
48
2
0
48
1.15

Tables:   1

The End!