Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011986.1 Corchorus capsularis cultivar CVL-1 contig12007, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4223

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2145
333
6.4
336
76
10
2015
32
14
16
36
1.90
1--2145
672
3.2
665
90
2
3409
32
14
16
36
1.90
2106--2181
39
1.9
40
82
12
95
32
9
15
42
1.79
2754--2808
27
2.0
27
96
0
101
52
10
14
21
1.72
3683--4026
50
7.0
50
89
2
516
31
23
37
7
1.83
3665--4026
98
3.7
98
88
3
507
32
23
36
7
1.83
3665--4026
148
2.5
147
89
2
541
32
23
36
7
1.83

Tables:   1

The End!