Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011999.1 Corchorus capsularis cultivar CVL-1 contig12020, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21963

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1574--1852
96
2.9
96
81
5
302
43
11
16
29
1.83
1625--1923
93
3.2
93
79
8
216
46
9
15
29
1.76
2573--7282
324
14.7
317
83
7
4711
35
16
13
34
1.88
7585--8300
328
2.2
322
83
4
886
35
13
14
35
1.87
8666--8723
27
2.3
25
80
11
64
31
10
1
56
1.43
13894--13942
2
24.0
2
91
4
80
48
4
0
46
1.20
18050--18083
6
5.7
6
89
0
50
20
2
58
17
1.51

Tables:   1

The End!