Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012003.1 Corchorus capsularis cultivar CVL-1 contig12024, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9085

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--39
2
19.5
2
100
0
78
51
0
0
48
1.00
1696--1746
25
2.0
25
85
7
68
41
9
1
47
1.48
3047--3180
67
2.0
68
91
1
216
41
11
8
38
1.72
6649--6732
2
44.5
2
75
15
72
45
2
0
52
1.13
7121--7209
45
2.0
45
91
4
144
26
19
20
33
1.96
9055--9084
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!