Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012004.1 Corchorus capsularis cultivar CVL-1 contig12025, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8745

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
511--539
10
3.0
10
95
5
51
31
10
37
20
1.86
1193--1405
115
1.9
114
83
5
277
30
13
22
34
1.92
3309--3340
17
1.9
16
93
6
55
62
6
12
18
1.50
4380--4438
29
2.0
29
96
0
109
37
23
15
23
1.93
4898--5086
99
1.9
100
81
11
233
25
11
24
38
1.89
4898--5086
104
1.9
99
84
7
254
25
11
24
38
1.89
5171--5394
91
2.5
91
90
0
349
30
20
13
35
1.91
7922--7954
14
2.5
13
90
9
57
39
0
15
45
1.46

Tables:   1

The End!