Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012005.1 Corchorus capsularis cultivar CVL-1 contig12026, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4731

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1854--1911
26
2.3
24
79
8
62
44
1
1
51
1.21
2188--2371
22
8.3
22
73
13
144
34
8
16
39
1.80
2306--2363
23
2.5
23
83
5
73
37
5
12
44
1.64
2407--2751
22
15.6
22
68
13
111
39
10
16
33
1.82
2581--2644
21
2.8
22
79
11
67
43
9
10
35
1.72
2625--2774
66
2.3
66
81
6
171
42
10
13
34
1.77
2722--2766
21
2.1
21
84
8
56
46
6
11
35
1.66
2625--2773
22
6.8
22
70
6
79
42
10
13
33
1.77
2876--3266
22
18.0
22
68
20
141
37
9
14
38
1.79
3023--3124
23
4.5
22
83
8
100
37
8
13
40
1.76

Tables:   1

The End!