Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012015.1 Corchorus capsularis cultivar CVL-1 contig12036, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30038

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6980--7031
27
2.1
26
86
13
74
25
15
15
44
1.85
7697--7739
22
2.0
21
95
4
77
16
27
13
41
1.86
8735--8826
46
2.0
46
89
0
139
53
17
10
18
1.72
9326--9419
36
2.6
36
98
0
179
43
13
11
30
1.80
12644--12768
22
5.7
22
68
12
71
42
11
10
36
1.75
20218--20276
18
3.3
18
64
17
50
8
35
3
52
1.49
20201--20311
36
3.0
36
90
2
168
13
31
3
51
1.58
21391--21456
25
2.6
25
97
0
123
36
19
15
28
1.92
22995--23029
16
2.2
16
100
0
70
25
37
5
31
1.80
24391--24429
19
2.1
19
90
4
62
12
48
5
33
1.63

Tables:   1

The End!