Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012034.1 Corchorus capsularis cultivar CVL-1 contig12055, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38446

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3703--3797
25
3.8
25
97
0
172
20
22
28
29
1.98
4411--4475
34
1.9
34
96
0
121
32
13
4
49
1.63
15061--15091
2
15.5
2
100
0
62
51
0
0
48
1.00
18338--18371
1
34.0
1
100
0
68
100
0
0
0
0.00
20132--20207
28
2.6
30
75
14
77
25
14
13
47
1.80
26843--27081
122
2.0
121
95
0
433
26
16
12
44
1.83
30858--30882
12
2.1
12
100
0
50
60
16
0
24
1.36
36368--36419
20
2.5
21
78
18
63
30
21
26
21
1.98

Tables:   1

The End!