Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012039.1 Corchorus capsularis cultivar CVL-1 contig12060, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11640

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
285--315
16
1.9
16
93
0
53
16
3
25
54
1.56
3447--3830
49
7.9
49
80
3
373
32
16
28
22
1.96
3426--3817
97
4.0
95
80
6
351
33
16
27
22
1.96
4213--4260
23
2.0
23
84
4
60
39
2
6
52
1.39
5286--5310
10
2.5
10
100
0
50
92
0
8
0
0.40

Tables:   1

The End!