Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012042.1 Corchorus capsularis cultivar CVL-1 contig12063, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43513

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
599--661
33
2.0
31
84
6
81
26
22
14
36
1.92
2382--2432
20
2.5
21
78
9
61
17
9
15
56
1.65
9700--9756
21
2.7
21
71
17
55
21
7
24
47
1.75
11316--11367
25
2.1
25
85
7
70
19
5
3
71
1.22
17907--17941
8
4.4
8
100
0
70
88
0
11
0
0.51
18566--18612
23
2.0
23
91
0
76
23
34
27
14
1.94
21496--21520
10
2.5
10
100
0
50
48
20
8
24
1.76
22456--22517
29
2.3
26
81
18
74
17
6
16
59
1.57
29061--29085
10
2.5
10
100
0
50
48
20
8
24
1.76
29987--30027
13
3.2
12
86
10
55
17
9
9
63
1.51
30024--30058
13
2.8
12
87
12
52
34
0
14
51
1.42
30024--30058
6
5.5
6
93
6
52
34
0
14
51
1.42
34540--34633
33
3.0
30
75
11
91
25
36
26
11
1.90

Tables:   1

The End!