Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012043.1 Corchorus capsularis cultivar CVL-1 contig12064, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38579

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16059--16091
13
2.4
14
90
5
50
60
6
33
0
1.21
21090--21122
2
17.0
2
93
6
59
48
0
0
51
1.00
21758--21808
24
2.1
25
92
3
86
50
5
11
31
1.62
23459--23490
6
5.5
6
96
3
57
31
0
12
56
1.37
29230--29282
10
5.0
10
73
13
52
5
22
45
26
1.74
31393--31424
6
5.5
6
96
3
57
31
0
12
56
1.37
31750--32144
196
2.0
196
98
0
772
28
17
17
36
1.93
36882--36979
28
3.5
28
75
8
119
9
34
3
53
1.49

Tables:   1

The End!