Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012044.1 Corchorus capsularis cultivar CVL-1 contig12065, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3923

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1612--1830
110
2.0
110
99
0
429
35
20
9
35
1.84
1649--1821
55
3.1
55
63
23
137
34
21
9
34
1.86
3529--3602
22
3.4
23
83
9
86
52
5
20
21
1.66
3585--3889
55
5.5
55
95
1
506
49
7
17
25
1.72
3591--3674
26
3.2
25
65
21
62
51
8
16
23
1.72

Tables:   1

The End!