Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012050.1 Corchorus capsularis cultivar CVL-1 contig12071, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7917

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
552--629
6
13.0
6
74
5
59
21
61
11
5
1.49
552--634
30
2.8
30
81
3
96
21
61
10
6
1.50
558--625
24
2.8
24
88
0
91
23
61
8
5
1.47
585--649
15
4.3
15
74
0
67
21
66
4
7
1.36
610--652
21
2.0
21
90
0
68
20
65
2
11
1.36
585--657
6
12.7
6
72
8
53
21
64
4
9
1.40
561--649
30
3.0
30
79
0
97
23
62
6
6
1.44
926--969
2
22.0
2
100
0
88
50
0
0
50
1.00
6031--6075
20
2.2
20
84
4
54
66
8
8
15
1.43

Tables:   1

The End!