Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012053.1 Corchorus capsularis cultivar CVL-1 contig12074, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3179

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1047--1121
22
3.4
22
80
7
73
38
12
13
36
1.82
1071--1342
22
12.6
21
67
12
88
35
13
9
42
1.76
1330--1380
19
2.6
20
90
6
86
25
17
11
45
1.83
1461--1715
22
11.6
23
70
11
101
32
13
10
43
1.79
1738--1792
22
2.5
23
82
11
71
38
16
5
40
1.72
1756--1803
22
2.2
22
88
0
69
43
20
4
31
1.71
1903--2042
22
6.3
22
71
9
95
37
19
10
33
1.85
2208--2245
20
2.0
20
85
15
53
63
5
5
26
1.37

Tables:   1

The End!