Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012054.1 Corchorus capsularis cultivar CVL-1 contig12075, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4625

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
629--683
25
2.2
25
96
0
101
45
7
5
41
1.55
1743--1801
30
1.9
31
89
3
93
30
15
3
50
1.60
1743--1809
30
2.2
31
86
5
91
31
13
4
50
1.61
1898--1993
38
2.6
37
86
6
140
13
16
12
57
1.66
3376--3575
22
9.3
22
72
13
96
33
9
17
40
1.80
3377--3525
44
3.4
44
82
3
158
35
10
16
38
1.82
3611--3958
22
15.7
21
66
19
86
38
10
16
34
1.83
3789--3958
22
7.6
22
73
8
103
38
10
15
35
1.82
4064--4600
22
24.6
22
70
9
215
38
10
15
36
1.81
4230--4309
23
3.5
23
86
1
108
37
7
15
40
1.75

Tables:   1

The End!