Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012058.1 Corchorus capsularis cultivar CVL-1 contig12079, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13619

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2384--2643
62
4.2
62
91
1
409
26
23
13
36
1.91
12754--12927
15
11.6
14
66
25
58
16
20
3
59
1.51
12800--12902
36
3.0
35
87
8
140
15
20
3
60
1.51
12876--12929
7
7.7
7
78
13
58
16
16
1
64
1.37
12752--12909
36
4.4
36
75
13
130
16
20
3
59
1.50
12752--12920
14
11.4
14
68
21
62
16
20
3
59
1.52
12848--13096
21
11.8
21
73
14
174
19
21
4
55
1.61
12954--12994
15
2.9
14
85
7
55
19
17
7
56
1.64
12896--13096
85
2.4
86
82
8
234
19
20
4
54
1.62
13195--13364
38
4.5
38
88
2
227
27
16
7
49
1.71
13195--13364
76
2.2
76
89
4
254
27
16
7
49
1.71
13270--13330
19
3.4
16
68
23
50
27
16
4
50
1.65

Tables:   1

The End!