Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012063.1 Corchorus capsularis cultivar CVL-1 contig12084, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34453

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4112--4136
10
2.5
10
100
0
50
72
8
12
8
1.29
6195--6244
25
2.0
25
88
0
73
44
24
14
18
1.86
6210--6257
25
1.9
25
83
8
62
43
29
12
14
1.82
6274--6335
31
2.0
32
87
3
90
33
19
12
33
1.90
15254--15279
2
13.0
2
100
0
52
50
0
0
50
1.00
18690--18720
14
2.2
14
94
0
53
74
0
19
6
1.03
22666--22690
6
4.2
6
100
0
50
0
16
68
16
1.22
23545--23584
13
3.1
13
85
0
53
25
15
15
45
1.84
26015--26397
200
1.9
200
97
0
730
35
21
19
24
1.96
28277--28416
41
3.4
41
89
3
194
35
13
16
35
1.88
30327--30365
20
2.0
20
85
10
53
58
28
7
5
1.47
30596--30633
17
2.2
18
86
9
53
76
0
15
7
1.01
31515--31544
15
1.9
16
93
6
53
63
10
6
20
1.47

Tables:   1

The End!