Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012066.1 Corchorus capsularis cultivar CVL-1 contig12087, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14505

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3186--3245
29
2.1
29
96
3
113
33
21
26
18
1.96
6456--6607
76
2.0
76
97
0
286
25
17
20
36
1.94
11849--11875
13
2.1
13
100
0
54
29
14
29
25
1.95
11925--12000
22
3.3
22
64
25
57
30
10
34
25
1.89
11865--12009
48
3.0
48
95
0
254
31
11
33
23
1.90
12141--12180
15
2.7
15
92
0
62
22
20
35
22
1.96
12375--12598
115
1.9
116
90
4
355
31
19
15
33
1.93

Tables:   1

The End!