Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012077.1 Corchorus capsularis cultivar CVL-1 contig12098, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42250

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--44
2
21.5
2
95
4
79
47
0
2
50
1.13
25676--25722
24
2.0
24
100
0
94
48
8
4
38
1.53
38670--38780
56
2.0
55
89
8
172
45
9
6
38
1.63
39991--40024
2
16.5
2
87
6
50
47
5
0
47
1.26
40116--40390
109
2.5
109
92
4
446
38
10
1
49
1.49
40651--40685
16
2.2
16
94
0
61
8
11
25
54
1.64
41133--41191
31
1.9
31
93
6
102
27
20
5
47
1.71
41505--41541
18
2.0
19
85
15
51
29
2
2
64
1.21
41709--41848
22
6.3
22
73
8
95
33
10
18
37
1.86
41948--42242
22
13.4
22
68
14
74
39
9
16
34
1.81
42072--42136
21
2.9
22
81
11
69
40
9
16
33
1.81
42144--42250
22
4.9
22
74
11
94
44
7
15
31
1.75

Tables:   1

The End!