Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012080.1 Corchorus capsularis cultivar CVL-1 contig12101, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8484

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
634--731
52
1.9
51
85
2
133
34
27
20
17
1.95
684--782
31
3.2
31
85
0
126
33
27
21
18
1.96
2650--2705
27
2.1
27
86
0
76
50
16
10
23
1.76
3119--3162
5
8.2
5
80
14
52
59
2
0
38
1.10
3996--4070
31
2.5
31
86
4
100
30
13
10
45
1.77
5519--5592
29
2.5
31
88
4
107
48
14
13
22
1.79
6684--7533
440
1.9
440
89
1
1312
42
15
12
29
1.84

Tables:   1

The End!