Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012088.1 Corchorus capsularis cultivar CVL-1 contig12109, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16831

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4628--4700
36
2.0
36
100
0
146
16
10
23
49
1.77
5106--5196
44
2.1
44
97
0
173
32
6
9
50
1.61
5754--5786
17
1.9
17
100
0
66
30
12
18
39
1.87
9763--10001
78
3.2
77
87
7
332
48
0
13
37
1.46
9851--10001
70
2.2
70
87
2
214
50
0
13
35
1.46
9664--10535
440
2.0
431
96
2
1620
47
4
12
36
1.61
10209--10433
70
3.1
70
85
9
315
48
0
13
37
1.42
10203--10441
78
3.2
77
90
7
359
49
0
12
37
1.44
14752--14793
22
2.0
21
95
4
75
42
21
23
11
1.86

Tables:   1

The End!